CDS

Accession Number TCMCG081C08808
gbkey CDS
Protein Id XP_002282256.1
Location join(9637019..9637137,9637585..9637720,9637822..9637919,9641842..9641917,9642100..9642219,9649960..9650007,9650303..9650367,9652886..9652971,9654409..9654573,9675012..9675121,9675213..9675318,9675424..9675499,9686148..9686206,9688465..9688532,9702938..9703111,9705333..9705539,9706333..9706589,9706983..9707126,9708620..9708677,9712332..9712631,9714051..9714782,9715063..9715293)
Gene LOC100266612
GeneID 100266612
Organism Vitis vinifera

Protein

Length 1144aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA33471
db_source XM_002282220.4
Definition PREDICTED: DNA mismatch repair protein MSH1, mitochondrial isoform X1 [Vitis vinifera]

EGGNOG-MAPPER Annotation

COG_category L
Description DNA mismatch repair protein
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE -
KEGG_ko -
EC -
KEGG_Pathway -
GOs GO:0000002        [VIEW IN EMBL-EBI]
GO:0000217        [VIEW IN EMBL-EBI]
GO:0000404        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003677        [VIEW IN EMBL-EBI]
GO:0003684        [VIEW IN EMBL-EBI]
GO:0003690        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005739        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006259        [VIEW IN EMBL-EBI]
GO:0006281        [VIEW IN EMBL-EBI]
GO:0006298        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0006974        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0007005        [VIEW IN EMBL-EBI]
GO:0008094        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009266        [VIEW IN EMBL-EBI]
GO:0009408        [VIEW IN EMBL-EBI]
GO:0009507        [VIEW IN EMBL-EBI]
GO:0009536        [VIEW IN EMBL-EBI]
GO:0009579        [VIEW IN EMBL-EBI]
GO:0009628        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0016020        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016462        [VIEW IN EMBL-EBI]
GO:0016787        [VIEW IN EMBL-EBI]
GO:0016817        [VIEW IN EMBL-EBI]
GO:0016818        [VIEW IN EMBL-EBI]
GO:0016887        [VIEW IN EMBL-EBI]
GO:0017111        [VIEW IN EMBL-EBI]
GO:0030983        [VIEW IN EMBL-EBI]
GO:0032042        [VIEW IN EMBL-EBI]
GO:0032135        [VIEW IN EMBL-EBI]
GO:0032300        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0033554        [VIEW IN EMBL-EBI]
GO:0034357        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0042623        [VIEW IN EMBL-EBI]
GO:0042651        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043570        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044436        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051276        [VIEW IN EMBL-EBI]
GO:0051716        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1990391        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGTACTGGCTGTCAACCAAAAACGTCGTCGTTTCATTCCCTCGATTCTACTCTCTCGCTCTTCTTCTCCGTTCCCCTGCCTGCAAATACACTTCATTTCGTTCTTCTACACTTCTACTCCAACAGTTTGAGAAGAGCCGATGTCTCAACGAAAGGAGGGTTTTGAAAGGAGCTGGAAGAATGACAAAAAATGTTATAGGATTGCAAAATGAGCTAGATGAAAAGGATCTTTCTCACATAATGTGGTGGAAGGAGAGGATGCAAATGTGTAAAAAGCCGTCCACTGTCCACCTTGTTAAAAGGCTTATATATTCCAATTTGCTAGGAGTGGATCCTAACTTGAAAAATGGGAATCTAAAAGAAGGAACGCTGAACTGGGAGATGTTGCAGTTCAAGTCAAAGTTTCCTCGTGAAGTTTTACTCTGCAGAGTAGGGGATTTTTATGAAGCCATCGGAATTGATGCTTGTATTCTTGTTGAATATGCTGGTTTGAATCCTTTTGGTGGTTTGCGCTCAGACAGTATACCAAGAGCTGGCTGCCCAGTCATGAATCTACGACAAACTTTGGATGACCTGACACGTAGCGGGTATTCAGTTTGCATAGTGGAGGAAGTTCAGGGTCCAACTCAAGCTCGTTCTCGTAAAGGTCGTTTTATCTCTGGGCATGCGCATCCGGGTAGTCCTTATGTATTTGGACTTGTTGGGGTTGATCATGATCTTGATTTTCCAGAACCAATGCCTGTAGTTGGAATTTCTCGTTCTGCGAAGGGTTATTCTATAATTTTAGTCCTTGAGACTATGAAGACGTTTTCAGTAGAGGATGGTCTGACAGAAGAGGCTTTAGTTACCAAGCTTCGCACTTGTCACTACCATCATTTATTGCTGCATACATCTCTGAGACGCAACTCCTCAGGTACTTGTCGTTGGGGAGAATTTGGTGAGGGAGGACTATTATGGGGAGAATGTAGTGCTAGACACTTTGAATGGTTTGAAGGGGATCCTGTATCTCAACTTTTGTTTAAGGTGAAGGAGCTCTATGGTTTTGATGATCAAGTTACATTTAGAAATGTCACTGTGTCTTCAGAGAAAAGACCCCGTTCTTTACACCTTGGCACAGCTACACAAATTGGTGCCATACCAACAGAGGGCATACCGTGTTTGTTAAAGGTGTTGCTTCCATCAAATTGCACTGGTCTACCTCTTTTGTATGTTAGAGATCTTCTTCTCAACCCTCCTGCTTATGAGATTGCATCCATAATTCAAGCAACATGCAGACTCATGAACAATGTAACGTGCTCGATTCCTGAGTTTACTTGTGTTTCCCCTGCAAAGCTTGTGAAGCTACTTGAGCTTAGGGAGGCTAATCATATTGAGTTCTGCAGAATAAAAAGTGTACTTGATGAAATATTGCAGATGCATAGAAACTCTGATCTTAACAAAATCCTTAAATTATTGATGGATCCTACCTGGGTGGCAACTGGATTGAAGATTGACTTTGACACATTGGTGAACGAATGTGAATGGATTTCAGCTAGAATTGGTAAAATGATCTTTCTTGATGGTGAAAATGATCAAAAGATAAGTTACCATCCTATCATTCCAAATGACTTTTTTGAGGACATGGAATCTCCTTGGAAGGGTCGTGTGAAGAGGATCCATGTAGAAGAAGCATTTGCTGAAGTGGAAAGAGCAGCTGAGGCATTATCTTTAGCTATCTCCGAAGATTTTCTACCTATTATTTCAAGAATAAAAGCTACCACAGCCCCACTTGGAGGTCCAAAAGGAGAAGTTGTATATGCTCGAGAGCATGAAGCTGTTTGGTTCAAGGGAAAACGTTTTGCACCAGTTGCATGGGCAGGTACTCCAGGGGAAGAACAAATTAAGCAGCTTAGACCTGCTATAGATTCAAAAGGTAGAAAGGTTGGATTGGAATGGTTTACCACAGTGAAGGTGGAGGATGCACTAACAAGGTACCATGAGGCTGGGGACAAGGCAAAAGCAAGGGTCTTGGAATTGTTGAGGGGACTTTCTGCGGAGTTACAAACTAAAATTAACATCCTTATCTTTGCTTCCATGTTGCTTGTCATTGCAAAGGCATTATTTGCTCATGTGAGTGAAGGGAGAAGAAGGAAATGGGTTTTCCCCTCTCTTGTAGAGTTGCATAGGTCTAAGGACATGGAACCTCTGGATGGAGCTAATTGGATGAAGATAACTGGTTTATCACCATATTGGTTGGACGTGGCACAAGGCAGTGCTGTGCATAATACAGTTGATATGAAATCATTGTTTCTTTTGACAGGACCTAATGGGGGTGGTAAATCAAGTTTGCTTCGATCAATTTGTGCAGCCGCATTACTTGGAATATGTGGATTTATGGTGCCTGCAGAATCGGCCTTGATTCCTCATTTTGATTCTATTATGCTTCACATGAAATCTTATGATAGCCCAGCTGATGGAAAAAGTTCATTTCAGATTGAAATGTCAGAGATGCGATCCATAATCACTGGAGCCACTTCAAGAAGCCTGGTGCTGATAGATGAAATCTGCCGAGGAACAGAAACAGCAAAGGGGACATGTATTGCTGGTAGCATAGTTGAAACTCTTGATAAGATTGGTTGTCTGGGTATTGTATCCACTCACTTGCATGGTATATTTACCTTGGGACTGAATACTAAGAATGCTATTTGTAAAGCAATGGGAACTGAATATGTTGATGGCAAAACAAAACCGACCTGGAAGTTGATAGATGGAATCTGTAGAGAAAGCCTTGCCTTTGAAACAGCTCAGAAGGAGGGAATTCCTGAAACAATTATCCGAAGAGCAGAAGAGCTGTATCTTTCAATCCATTCAAAAGACTTGTTATCAGGAAGAAATGAAACAGAACTGGGACATTTTTGTCTTGATACAACTGTAAATACTTCAGGTGAAGTCTATAATCAATTAAGTAGAATTACAGGGGGAACTATTTGTCCTAAAATTGAGTCAACAAATGAAATGGAAGTCTTACATAAGAAAGTTGAGAGTGCAGTCACCATTGTTTGCCAAAAGAAGCTGAAGGAGCTCTATAAGCAGAAAAACACGTCAAAACTTCCAGAGATAAACTGTGTGGCCATTTTGCCAGGGGAACAGCCGCCGCCATCAACAATTGGTGCTTCAAGTGTGTATGTGTTGTTTAGCACTGATAAGAAACTTTATGTTGGAGAGACAGATGATCTTGAAGGCAGAGTCCGTGCGCATCGATCAAAGGAAGGAATGCAGAAGGCCTCATTCCTTTATTTTGTGGTCCCAGGGAAGAGCTTGGCATGCCAACTCGAAACGCTTCTCATCAACCAGCTCCCTGTCCAGGGGTTCCAACTGGTCAATAGAGCTGATGGTAAACATCGAAATTTTGGCACATTGGATCACTCCGTGGAAGTTGTGACCTTGCATCAATGA
Protein:  
MYWLSTKNVVVSFPRFYSLALLLRSPACKYTSFRSSTLLLQQFEKSRCLNERRVLKGAGRMTKNVIGLQNELDEKDLSHIMWWKERMQMCKKPSTVHLVKRLIYSNLLGVDPNLKNGNLKEGTLNWEMLQFKSKFPREVLLCRVGDFYEAIGIDACILVEYAGLNPFGGLRSDSIPRAGCPVMNLRQTLDDLTRSGYSVCIVEEVQGPTQARSRKGRFISGHAHPGSPYVFGLVGVDHDLDFPEPMPVVGISRSAKGYSIILVLETMKTFSVEDGLTEEALVTKLRTCHYHHLLLHTSLRRNSSGTCRWGEFGEGGLLWGECSARHFEWFEGDPVSQLLFKVKELYGFDDQVTFRNVTVSSEKRPRSLHLGTATQIGAIPTEGIPCLLKVLLPSNCTGLPLLYVRDLLLNPPAYEIASIIQATCRLMNNVTCSIPEFTCVSPAKLVKLLELREANHIEFCRIKSVLDEILQMHRNSDLNKILKLLMDPTWVATGLKIDFDTLVNECEWISARIGKMIFLDGENDQKISYHPIIPNDFFEDMESPWKGRVKRIHVEEAFAEVERAAEALSLAISEDFLPIISRIKATTAPLGGPKGEVVYAREHEAVWFKGKRFAPVAWAGTPGEEQIKQLRPAIDSKGRKVGLEWFTTVKVEDALTRYHEAGDKAKARVLELLRGLSAELQTKINILIFASMLLVIAKALFAHVSEGRRRKWVFPSLVELHRSKDMEPLDGANWMKITGLSPYWLDVAQGSAVHNTVDMKSLFLLTGPNGGGKSSLLRSICAAALLGICGFMVPAESALIPHFDSIMLHMKSYDSPADGKSSFQIEMSEMRSIITGATSRSLVLIDEICRGTETAKGTCIAGSIVETLDKIGCLGIVSTHLHGIFTLGLNTKNAICKAMGTEYVDGKTKPTWKLIDGICRESLAFETAQKEGIPETIIRRAEELYLSIHSKDLLSGRNETELGHFCLDTTVNTSGEVYNQLSRITGGTICPKIESTNEMEVLHKKVESAVTIVCQKKLKELYKQKNTSKLPEINCVAILPGEQPPPSTIGASSVYVLFSTDKKLYVGETDDLEGRVRAHRSKEGMQKASFLYFVVPGKSLACQLETLLINQLPVQGFQLVNRADGKHRNFGTLDHSVEVVTLHQ